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Invariant structural core found by TOPOFIT protein structure alignment |
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TOPOFIT Reference: Valentin A. Ilyin, Alexej Abyzov, and Chesley M.Leslin, Structural alignment of proteins by a novel TOPOFIT method, as a superimposition of common volumes at a topomax point. (preprint) Protein Science (2004), 13:1865-1874. |
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T-DB Reference: Chesley M.Leslin, Alexej Abyzov, and Valentin A. Ilyin, TOPOFIT-DB, a database of protein structural alignments based on the TOPOFIT method. (accepted). Nucleic Acids Research |
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One-2-all PDB server: This utility allows for the comparison between a user given pdb against the entire Protein Databank using TOPOFIT, all results can seen on the web or optionally emailed, and viewed with our in-house multiple structure alignment viewer FRIEND |
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